PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907322.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family SAP
Protein Properties Length: 479aa    MW: 52580.9 Da    PI: 5.954
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907322.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP512.12.7e-15614781454
             SAP   1 mssssssssseseegseggeggdass.............gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfq.... 78 
                     msss +ss s ++ g+ g+e+ + ++               s+ pss+r+r+a+ vwpe f+e++a++va+da+rs Grlaa +a+a +fq    
  XP_010907322.1   1 MSSSPASSPS-EGGGAGGEEERGDGGdeeivggpsdrppRRSGDPSSTRRRSADAVWPEHFVESVAVRVAVDAARSDGRLAAGPAMAAIFQllth 94 
                     5555443333.333333333333333467899999999989999**********************************************54444 PP

             SAP  79 .....vcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfa 168
                          vcstwravsrs+llw+  tr +W r   l  tW+ee++  hrtarnfrtrr+++ +l   pa       + alsCr+lalsd+ylaaGf 
  XP_010907322.1  95 eessqVCSTWRAVSRSELLWEDATRGVWYRRWSLLPTWHEEFVRLHRTARNFRTRRSAHSHL--LPA------ASPALSCRRLALSDRYLAAGFL 181
                     444449***************************************************99765..555......2358****************** PP

             SAP 169 dGavrlfdletrlhvstflpq.hrdrlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260
                     dG++rlf+l + lh++t++++ +rdrlG+fs+++sG+++ +  srlvfa  dGd++va +d + ++++rra++G++++dG+lvdfaG +rWwvGl
  XP_010907322.1 182 DGSIRLFELPSGLHLTTYRTHpQRDRLGPFSQSISGLILLSdpSRLVFACQDGDLYVAPLDDPVSGSTRRAHVGNLMEDGTLVDFAGDSRWWVGL 276
                     ******************986489************887432589************************************************** PP

             SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasn 354
                     +aG +Gr++h+Wdaete+lv+ GGsltdP++v GW mlt+l   +vGrvr  e  ++vaCts+rl v+dl ++g v +++e+rr  +v s+da +
  XP_010907322.1 277 FAGLAGRSWHVWDAETEQLVYEGGSLTDPDSVLGWRMLTDLDgPTVGRVRTPEPGAMVACTSSRLQVVDLDDPGEVSNQVEFRRRAVVESVDACD 371
                     *****************************************8679************************************************** PP

             SAP 355 eayvvvdsrGvatvrrvenleevcrfr....vrg....aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavs 441
                       ++vvd rG a+v r+ +l+evcrf+    ++g      +g++gC+n gya+v++ g lrvW+  + e ylys+rervg+v  + a+dr+va+ 
  XP_010907322.1 372 GRVMVVDLRGLARVLRARTLAEVCRFStvvrLEGhpqqRVQGMVGCMNWGYAVVCSVGSLRVWDASTGE-YLYSFRERVGDVTVVAASDRYVAAW 465
                     **************************633113446522345799********************99966.************************* PP

             SAP 442 ssdgtihlldfga 454
                      +d+ +hl+d+ga
  XP_010907322.1 466 VNDTGLHLWDYGA 478
                     ***********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.506.8E-597153No hitNo description
SuperFamilySSF813832.83E-598141IPR001810F-box domain
Gene3DG3DSA:2.130.10.101.5E-16169476IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509782.2E-17170292IPR017986WD40-repeat-containing domain
SuperFamilySSF509782.2E-17350476IPR017986WD40-repeat-containing domain
PROSITE profilePS502948.624429479IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MSSSPASSPS EGGGAGGEEE RGDGGDEEIV GGPSDRPPRR SGDPSSTRRR SADAVWPEHF  60
VESVAVRVAV DAARSDGRLA AGPAMAAIFQ LLTHEESSQV CSTWRAVSRS ELLWEDATRG  120
VWYRRWSLLP TWHEEFVRLH RTARNFRTRR SAHSHLLPAA SPALSCRRLA LSDRYLAAGF  180
LDGSIRLFEL PSGLHLTTYR THPQRDRLGP FSQSISGLIL LSDPSRLVFA CQDGDLYVAP  240
LDDPVSGSTR RAHVGNLMED GTLVDFAGDS RWWVGLFAGL AGRSWHVWDA ETEQLVYEGG  300
SLTDPDSVLG WRMLTDLDGP TVGRVRTPEP GAMVACTSSR LQVVDLDDPG EVSNQVEFRR  360
RAVVESVDAC DGRVMVVDLR GLARVLRART LAEVCRFSTV VRLEGHPQQR VQGMVGCMNW  420
GYAVVCSVGS LRVWDASTGE YLYSFRERVG DVTVVAASDR YVAAWVNDTG LHLWDYGAL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907322.10.0PREDICTED: transcriptional regulator STERILE APETALA
TrEMBLM0S7R21e-158M0S7R2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P13710_0011e-158(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1848179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-107SAP family protein